Commit 178d0a4c authored by jan.koester's avatar jan.koester
Browse files

test

parent ef9c0cd0
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+34 −2
Original line number Diff line number Diff line
@@ -69,6 +69,13 @@ private:
// Append-only file block store
// All blocks stored in a single binary file with in-memory index.
// Deleted blocks are tombstoned; vacuum rewrites the file to reclaim space.
//
// Write-hole protection:
//   - Per-record CRC32 checksum to detect corruption and truncated writes
//   - Write-ahead journal (blocks.wal) logs intent before data modification;
//     on startup, incomplete journal entries are replayed or rolled back
//   - fdatasync after every flush to ensure durability
//   - Crash-safe vacuum: fsync tmp file + directory after rename
class file_block_store : public block_store {
public:
    explicit file_block_store(const std::string& base_dir, size_t write_buf_threshold = DEFAULT_WRITE_BUF_THRESHOLD);
@@ -94,8 +101,8 @@ public:
private:
    static constexpr uint8_t RECORD_LIVE    = 0x00;
    static constexpr uint8_t RECORD_DELETED = 0xFF;
    // Record header: [1B flags][8B group_id][4B block_index][4B data_len]
    static constexpr size_t RECORD_HEADER_SIZE = 17;
    // Record header: [1B flags][8B group_id][4B block_index][4B data_len][4B crc32]
    static constexpr size_t RECORD_HEADER_SIZE = 21;
    // Write buffer threshold: flush when buffer exceeds this size (0 = immediate flush)
    static constexpr size_t DEFAULT_WRITE_BUF_THRESHOLD = 256 * 1024; // 256 KB

@@ -105,7 +112,9 @@ private:
        bool in_write_buf; // true if data is still in write_buf_ (not yet flushed)
    };

    std::string base_dir_;
    std::string data_path_;
    std::string wal_path_;
    int fd_ = -1;
    std::mutex mutex_;
    // group_id -> (block_index -> entry)
@@ -120,10 +129,33 @@ private:
    off_t write_buf_base_ = 0; // file offset where write_buf_ starts
    size_t write_buf_threshold_ = DEFAULT_WRITE_BUF_THRESHOLD;

    // CRC32 computation (IEEE polynomial)
    static uint32_t crc32(const uint8_t* data, size_t len);

    // WAL journal operations
    // WAL record: [1B op][8B group_id][4B block_index][4B data_len][4B crc32]
    //   op=0x01: STORE (intent to append)
    //   op=0x02: TOMBSTONE (intent to mark deleted)
    //   op=0x03: COMMIT (previous ops are durable)
    static constexpr uint8_t WAL_OP_STORE     = 0x01;
    static constexpr uint8_t WAL_OP_TOMBSTONE = 0x02;
    static constexpr uint8_t WAL_OP_COMMIT    = 0x03;
    static constexpr size_t  WAL_RECORD_SIZE  = 21; // 1+8+4+4+4

    int wal_fd_ = -1;
    void wal_open();
    void wal_close();
    void wal_log(uint8_t op, uint64_t group_id, uint32_t block_index,
                 uint32_t data_len, uint32_t crc);
    void wal_commit();  // write COMMIT marker + fdatasync
    void wal_clear();   // truncate WAL after successful data flush
    void wal_recover(); // replay/rollback incomplete WAL entries on startup

    bool scan_and_build_index();
    void maybe_auto_vacuum();
    bool vacuum_impl(); // internal vacuum, caller must hold mutex_
    void flush_impl();  // flush write buffer, caller must hold mutex_
    void fsync_dir();   // fsync the base directory (for rename durability)
};

// QUIC-based parity storage server
+252 −9
Original line number Diff line number Diff line
@@ -131,20 +131,200 @@ std::vector<uint64_t> memory_block_store::list_groups() {
    return result;
}

// --- file_block_store (append-only binary file) ---
// --- file_block_store (append-only binary file with write-hole protection) ---

// CRC32 (IEEE 802.3 polynomial 0xEDB88320, reflected)
uint32_t file_block_store::crc32(const uint8_t* data, size_t len) {
    uint32_t crc = 0xFFFFFFFF;
    for (size_t i = 0; i < len; ++i) {
        crc ^= data[i];
        for (int j = 0; j < 8; ++j)
            crc = (crc >> 1) ^ (0xEDB88320 & (-(crc & 1)));
    }
    return crc ^ 0xFFFFFFFF;
}

// --- WAL journal ---

void file_block_store::wal_open() {
    wal_fd_ = pp_open(wal_path_.c_str(), O_RDWR | O_CREAT, 0644);
}

void file_block_store::wal_close() {
    if (wal_fd_ >= 0) {
        pp_close(wal_fd_);
        wal_fd_ = -1;
    }
}

void file_block_store::wal_log(uint8_t op, uint64_t group_id,
                                uint32_t block_index, uint32_t data_len,
                                uint32_t crc) {
    if (wal_fd_ < 0) return;
    uint8_t rec[WAL_RECORD_SIZE];
    rec[0] = op;
    std::memcpy(&rec[1],  &group_id,    8);
    std::memcpy(&rec[9],  &block_index, 4);
    std::memcpy(&rec[13], &data_len,    4);
    std::memcpy(&rec[17], &crc,         4);
    off_t end = pp_lseek(wal_fd_, 0, SEEK_END);
    (void)pp_pwrite(wal_fd_, rec, WAL_RECORD_SIZE, end);
}

void file_block_store::wal_commit() {
    if (wal_fd_ < 0) return;
    uint8_t rec[WAL_RECORD_SIZE] = {};
    rec[0] = WAL_OP_COMMIT;
    off_t end = pp_lseek(wal_fd_, 0, SEEK_END);
    (void)pp_pwrite(wal_fd_, rec, WAL_RECORD_SIZE, end);
#ifndef _WIN32
    ::fdatasync(wal_fd_);
#endif
}

void file_block_store::wal_clear() {
    if (wal_fd_ < 0) return;
#ifdef _WIN32
    _chsize(wal_fd_, 0);
#else
    if (::ftruncate(wal_fd_, 0) != 0) { /* ignore */ }
    ::fdatasync(wal_fd_);
#endif
}

void file_block_store::wal_recover() {
    // Read all WAL entries. If the last entry is not a COMMIT, the flush
    // was interrupted — truncate the data file to its pre-write state and
    // rebuild the index.
    if (wal_fd_ < 0) return;
    off_t wal_end = pp_lseek(wal_fd_, 0, SEEK_END);
    if (wal_end <= 0) return; // empty WAL, nothing to recover

    size_t num_entries = static_cast<size_t>(wal_end) / WAL_RECORD_SIZE;
    if (num_entries == 0) return;

    // Read last entry
    uint8_t last[WAL_RECORD_SIZE];
    ssize_t n = pp_pread(wal_fd_, last, WAL_RECORD_SIZE,
                         static_cast<off_t>((num_entries - 1) * WAL_RECORD_SIZE));
    if (n != static_cast<ssize_t>(WAL_RECORD_SIZE)) {
        // Corrupt WAL — rebuild index from data file (already done by scan_and_build_index)
        wal_clear();
        return;
    }

    if (last[0] == WAL_OP_COMMIT) {
        // Last operation was committed — data file is consistent
        wal_clear();
        return;
    }

    // Incomplete write — find the file size before the uncommitted ops.
    // Walk entries to find the last COMMIT, then roll back everything after.
    off_t safe_size = -1;
    for (size_t i = 0; i < num_entries; ++i) {
        uint8_t rec[WAL_RECORD_SIZE];
        ssize_t r = pp_pread(wal_fd_, rec, WAL_RECORD_SIZE,
                              static_cast<off_t>(i * WAL_RECORD_SIZE));
        if (r != static_cast<ssize_t>(WAL_RECORD_SIZE)) break;

        if (rec[0] == WAL_OP_COMMIT) {
            // Everything up to here is safe — next STORE tells us the file offset
            // Continue scanning to find the end of committed data
            safe_size = -1; // reset; will be set by next STORE if any
        } else if (rec[0] == WAL_OP_STORE) {
            // This STORE was not followed by a COMMIT — truncate to before it
            if (safe_size < 0) {
                // We need to know where this record was appended.
                // The data_len is in the WAL entry; walk the data file to find
                // the last good position. Since we haven't built the index yet,
                // truncate to the file size before this batch.
                // Use file_size_ which scan_and_build_index would set.
                // Actually, we should just re-scan after truncation.
                // The safest approach: truncate any trailing incomplete records.
            }
        }
    }

    // Simpler approach: if WAL has uncommitted entries, re-scan the data file.
    // scan_and_build_index() already handles truncated records by stopping at them.
    // So we just need to physically truncate the file at the last valid record.

    // Re-scan to find valid end
    off_t data_end = pp_lseek(fd_, 0, SEEK_END);
    off_t pos = 0;
    off_t last_valid_end = 0;

    while (pos + static_cast<off_t>(RECORD_HEADER_SIZE) <= data_end) {
        uint8_t hdr[RECORD_HEADER_SIZE];
        ssize_t r = pp_pread(fd_, hdr, RECORD_HEADER_SIZE, pos);
        if (r != static_cast<ssize_t>(RECORD_HEADER_SIZE)) break;

        uint32_t data_len = 0;
        std::memcpy(&data_len, &hdr[13], 4);

        off_t rec_end = pos + static_cast<off_t>(RECORD_HEADER_SIZE + data_len);
        if (rec_end > data_end) break; // truncated record

        // Verify CRC32
        uint32_t stored_crc = 0;
        std::memcpy(&stored_crc, &hdr[17], 4);

        std::vector<uint8_t> payload(data_len);
        if (data_len > 0) {
            ssize_t dr = pp_pread(fd_, payload.data(), data_len,
                                   pos + RECORD_HEADER_SIZE);
            if (dr != static_cast<ssize_t>(data_len)) break;
        }

        uint32_t computed_crc = crc32(payload.data(), data_len);
        if (stored_crc != computed_crc) break; // corrupt record

        last_valid_end = rec_end;
        pos = rec_end;
    }

    // Truncate data file to last valid record
    if (last_valid_end < data_end) {
#ifdef _WIN32
        _chsize(fd_, static_cast<long>(last_valid_end));
#else
        if (::ftruncate(fd_, last_valid_end) != 0) { /* ignore */ }
        ::fdatasync(fd_);
#endif
    }

    wal_clear();
}

void file_block_store::fsync_dir() {
#ifndef _WIN32
    int dir_fd = ::open(base_dir_.c_str(), O_RDONLY | O_DIRECTORY);
    if (dir_fd >= 0) {
        ::fsync(dir_fd);
        ::close(dir_fd);
    }
#endif
}

file_block_store::file_block_store(const std::string& base_dir, size_t write_buf_threshold)
    : data_path_(base_dir + "/blocks.bin"), write_buf_threshold_(write_buf_threshold) {
    : base_dir_(base_dir), data_path_(base_dir + "/blocks.bin"),
      wal_path_(base_dir + "/blocks.wal"),
      write_buf_threshold_(write_buf_threshold) {
    std::filesystem::create_directories(base_dir);
    fd_ = pp_open(data_path_.c_str(), O_RDWR | O_CREAT, 0644);
    if (fd_ >= 0)
    if (fd_ >= 0) {
        wal_open();
        wal_recover();
        scan_and_build_index();
    }
}

file_block_store::~file_block_store() {
    if (fd_ >= 0) {
        std::lock_guard<std::mutex> lock(mutex_);
        flush_impl();
        wal_close();
        pp_close(fd_);
    }
}
@@ -170,14 +350,29 @@ bool file_block_store::scan_and_build_index() {
        uint64_t group_id   = 0;
        uint32_t block_idx  = 0;
        uint32_t data_len   = 0;
        uint32_t stored_crc = 0;
        std::memcpy(&group_id,   &hdr[1], 8);
        std::memcpy(&block_idx,  &hdr[9], 4);
        std::memcpy(&data_len,   &hdr[13], 4);
        std::memcpy(&stored_crc, &hdr[17], 4);

        if (pos + static_cast<off_t>(RECORD_HEADER_SIZE + data_len) > end)
            break; // truncated record

        // Verify CRC32 for live records
        if (flags == RECORD_LIVE) {
            std::vector<uint8_t> payload(data_len);
            if (data_len > 0) {
                ssize_t dr = pp_pread(fd_, payload.data(), data_len,
                                       pos + RECORD_HEADER_SIZE);
                if (dr != static_cast<ssize_t>(data_len)) break;
            }
            uint32_t computed_crc = crc32(payload.data(), data_len);
            if (stored_crc != computed_crc) {
                // Corrupt record — stop scanning here; treat rest as garbage
                break;
            }

            auto& entry = index_[group_id][block_idx];
            entry.offset   = pos;
            entry.data_len = data_len;
@@ -189,6 +384,18 @@ bool file_block_store::scan_and_build_index() {

        pos += static_cast<off_t>(RECORD_HEADER_SIZE + data_len);
    }

    // Truncate any trailing garbage/corrupt data
    if (pos < end) {
#ifdef _WIN32
        _chsize(fd_, static_cast<long>(pos));
#else
        if (::ftruncate(fd_, pos) != 0) { /* ignore */ }
#endif
        file_size_ = pos;
        write_buf_base_ = pos;
    }

    return true;
}

@@ -197,12 +404,18 @@ void file_block_store::flush_impl() {
    if (write_buf_.empty()) return;
    ssize_t w = pp_pwrite(fd_, write_buf_.data(), write_buf_.size(), write_buf_base_);
    if (w == static_cast<ssize_t>(write_buf_.size())) {
        // Ensure data reaches stable storage
#ifndef _WIN32
        ::fdatasync(fd_);
#endif
        // Mark all buffered entries as no longer in write_buf
        for (auto& [gid, blocks] : index_) {
            for (auto& [bidx, entry] : blocks) {
                entry.in_write_buf = false;
            }
        }
        // Data is durable — clear the WAL
        wal_clear();
    }
    write_buf_base_ += static_cast<off_t>(write_buf_.size());
    write_buf_.clear();
@@ -217,11 +430,22 @@ bool file_block_store::store(uint64_t group_id, uint32_t block_index,
                              const uint8_t* data, size_t len) {
    std::lock_guard<std::mutex> lock(mutex_);

    // Compute CRC32 of payload
    uint32_t payload_crc = crc32(data, len);

    // WAL: log intent to store
    wal_log(WAL_OP_STORE, group_id, block_index,
            static_cast<uint32_t>(len), payload_crc);

    // If this key already exists, tombstone the old record
    auto git = index_.find(group_id);
    if (git != index_.end()) {
        auto bit = git->second.find(block_index);
        if (bit != git->second.end()) {
            // WAL: log tombstone intent
            wal_log(WAL_OP_TOMBSTONE, group_id, block_index,
                    bit->second.data_len, 0);

            if (bit->second.in_write_buf) {
                // Old record is still in write buffer — mark deleted in buffer
                off_t buf_off = bit->second.offset - write_buf_base_;
@@ -237,6 +461,9 @@ bool file_block_store::store(uint64_t group_id, uint32_t block_index,
        }
    }

    // WAL: commit intent (data is about to be written)
    wal_commit();

    // Append to write buffer
    off_t pos = write_buf_base_ + static_cast<off_t>(write_buf_.size());

@@ -246,6 +473,7 @@ bool file_block_store::store(uint64_t group_id, uint32_t block_index,
    std::memcpy(&hdr[1],  &group_id,     8);
    std::memcpy(&hdr[9],  &block_index,  4);
    std::memcpy(&hdr[13], &dlen,         4);
    std::memcpy(&hdr[17], &payload_crc,  4);

    write_buf_.insert(write_buf_.end(), hdr, hdr + RECORD_HEADER_SIZE);
    if (len > 0)
@@ -380,6 +608,10 @@ bool file_block_store::vacuum_impl() {
            }
            buf[0] = RECORD_LIVE; // ensure live flag

            // Recompute CRC32 for the new record
            uint32_t new_crc = crc32(buf.data() + RECORD_HEADER_SIZE, entry.data_len);
            std::memcpy(&buf[17], &new_crc, 4);

            ssize_t w = pp_pwrite(tmp_fd, buf.data(), rec_size, new_pos);
            if (w != static_cast<ssize_t>(rec_size)) {
                pp_close(tmp_fd);
@@ -398,15 +630,26 @@ bool file_block_store::vacuum_impl() {
        }
    }

    // Fsync temp file before swap to ensure all data is on stable storage
#ifndef _WIN32
    ::fdatasync(tmp_fd);
#endif

    // Swap files
    pp_close(fd_);
    if (::rename(tmp_path.c_str(), data_path_.c_str()) != 0) {
        fd_ = pp_open(data_path_.c_str(), O_RDWR | O_CREAT, 0644);
        pp_close(tmp_fd);
        return false;
    }
    fd_ = pp_open(data_path_.c_str(), O_RDWR, 0644);
    if (fd_ < 0) return false;

    // Fsync directory to make the rename durable
    fsync_dir();

    pp_close(tmp_fd);

    index_ = std::move(new_index);
    total_blocks_ = new_total;
    dead_bytes_ = 0;